Print file information:
RUN_IN_PLACE=no
LINUXCNC_DIR=
LINUXCNC_BIN_DIR=/usr/bin
LINUXCNC_TCL_DIR=/usr/lib/tcltk/linuxcnc
LINUXCNC_SCRIPT_DIR=
LINUXCNC_RTLIB_DIR=/usr/realtime-2.6.32-122-rtai/modules/linuxcnc
LINUXCNC_CONFIG_DIR=
LINUXCNC_LANG_DIR=/usr/share/linuxcnc/tcl/msgs
INIVAR=inivar
HALCMD=halcmd
LINUXCNC_EMCSH=/usr/bin/wish8.5
LINUXCNC - 2.5.3
Machine configuration directory is '/home/johns/linuxcnc/configs/hm2-servo-1'
Machine configuration file is '5i25green.ini'
INIFILE=/home/johns/linuxcnc/configs/hm2-servo-1/5i25green.ini
PARAMETER_FILE=hm2-servo.var
TASK=milltask
HALUI=
DISPLAY=axis
Starting LinuxCNC...
Starting LinuxCNC server program: linuxcncsvr
Loading Real Time OS, RTAPI, and HAL_LIB modules
Starting LinuxCNC IO program: io
Shutting down and cleaning up LinuxCNC...
Killing task linuxcncsvr, PID=1851
Removing HAL_LIB, RTAPI, and Real Time OS modules
Removing NML shared memory segments
Cleanup done

Debug file information:
Can not find -sec MOT -var MOT -num 1 
Can not find -sec IO -var IO -num 1 
Can not find -sec LINUXCNC -var NML_FILE -num 1 
Can not find -sec EMC -var NML_FILE -num 1 
hm2-servogreen.hal:84: Pin 'hm2_5i25.0.8i20.0.0.amp_enable' does not exist
1851
  PID TTY      STAT   TIME COMMAND
Stopping realtime threads
Unloading hal components

Kernel message information:
[   73.849067] I-pipe: Domain RTAI registered.
[   73.849079] RTAI[hal]: <3.8.1> mounted over IPIPE-NOTHREADS 2.6-03.
[   73.849083] RTAI[hal]: compiled with gcc version 4.4.3 (Ubuntu 4.4.3-4ubuntu5) .
[   73.849170] RTAI[hal]: mounted (IPIPE-NOTHREADS, IMMEDIATE (INTERNAL IRQs DISPATCHED), ISOL_CPUS_MASK: 0).
[   73.849174] PIPELINE layers:
[   73.849179] efeb9e20 9ac15d93 RTAI 200
[   73.849183] c085cb20 0 Linux 100
[   73.881402] RTAI[malloc]: global heap size = 2097152 bytes, <BSD>.
[   73.882434] RTAI[sched]: IMMEDIATE, MP, USER/KERNEL SPACE: <with RTAI OWN KTASKs>, kstacks pool size = 524288 bytes.
[   73.882445] RTAI[sched]: hard timer type/freq = APIC/12498918(Hz); default timing: periodic; linear timed lists.
[   73.882450] RTAI[sched]: Linux timer freq = 250 (Hz), TimeBase freq = 1650038000 hz.
[   73.882455] RTAI[sched]: timer setup = 999 ns, resched latency = 2943 ns.
[   73.882581] RTAI[usi]: enabled.
[   73.962796] RTAI[math]: loaded.
[   74.186406] hm2: loading Mesa HostMot2 driver version 0.15
[   74.197587] hm2_pci: loading Mesa AnyIO HostMot2 driver version 0.7
[   74.197692] hm2_pci 0000:06:00.0: PCI INT A -> GSI 18 (level, low) -> IRQ 18
[   74.197699] hm2_pci: discovered 5i25 at 0000:06:00.0
[   74.198607] hm2/hm2_5i25.0: Smart Serial Firmware Version 43
[   74.255019] hm2/hm2_5i25.0: 34 I/O Pins used:
[   74.255025] hm2/hm2_5i25.0:     IO Pin 000 (P3-01): IOPort
[   74.255032] hm2/hm2_5i25.0:     IO Pin 001 (P3-14): IOPort
[   74.255036] hm2/hm2_5i25.0:     IO Pin 002 (P3-02): IOPort
[   74.255040] hm2/hm2_5i25.0:     IO Pin 003 (P3-15): IOPort
[   74.255044] hm2/hm2_5i25.0:     IO Pin 004 (P3-03): IOPort
[   74.255049] hm2/hm2_5i25.0:     IO Pin 005 (P3-16): IOPort
[   74.255053] hm2/hm2_5i25.0:     IO Pin 006 (P3-04): IOPort
[   74.255057] hm2/hm2_5i25.0:     IO Pin 007 (P3-17): IOPort
[   74.255061] hm2/hm2_5i25.0:     IO Pin 008 (P3-05): IOPort
[   74.255065] hm2/hm2_5i25.0:     IO Pin 009 (P3-06): IOPort
[   74.255071] hm2/hm2_5i25.0:     IO Pin 010 (P3-07): Muxed Encoder Select #0, pin Mux Select 0 (Output)
[   74.255077] hm2/hm2_5i25.0:     IO Pin 011 (P3-08): Muxed Encoder #0, pin Muxed A (Input)
[   74.255082] hm2/hm2_5i25.0:     IO Pin 012 (P3-09): Muxed Encoder #0, pin Muxed B (Input)
[   74.255087] hm2/hm2_5i25.0:     IO Pin 013 (P3-10): Muxed Encoder #0, pin Muxed Index (Input)
[   74.255093] hm2/hm2_5i25.0:     IO Pin 014 (P3-11): Muxed Encoder #1, pin Muxed A (Input)
[   74.255098] hm2/hm2_5i25.0:     IO Pin 015 (P3-12): Muxed Encoder #1, pin Muxed B (Input)
[   74.255103] hm2/hm2_5i25.0:     IO Pin 016 (P3-13): Muxed Encoder #1, pin Muxed Index (Input)
[   74.255108] hm2/hm2_5i25.0:     IO Pin 017 (P2-01): IOPort
[   74.255112] hm2/hm2_5i25.0:     IO Pin 018 (P2-14): IOPort
[   74.255116] hm2/hm2_5i25.0:     IO Pin 019 (P2-02): IOPort
[   74.255120] hm2/hm2_5i25.0:     IO Pin 020 (P2-15): IOPort
[   74.255124] hm2/hm2_5i25.0:     IO Pin 021 (P2-03): IOPort
[   74.255128] hm2/hm2_5i25.0:     IO Pin 022 (P2-16): IOPort
[   74.255132] hm2/hm2_5i25.0:     IO Pin 023 (P2-04): IOPort
[   74.255136] hm2/hm2_5i25.0:     IO Pin 024 (P2-17): IOPort
[   74.255140] hm2/hm2_5i25.0:     IO Pin 025 (P2-05): IOPort
[   74.255144] hm2/hm2_5i25.0:     IO Pin 026 (P2-06): IOPort
[   74.255148] hm2/hm2_5i25.0:     IO Pin 027 (P2-07): IOPort
[   74.255152] hm2/hm2_5i25.0:     IO Pin 028 (P2-08): IOPort
[   74.255156] hm2/hm2_5i25.0:     IO Pin 029 (P2-09): IOPort
[   74.255160] hm2/hm2_5i25.0:     IO Pin 030 (P2-10): IOPort
[   74.255164] hm2/hm2_5i25.0:     IO Pin 031 (P2-11): IOPort
[   74.255168] hm2/hm2_5i25.0:     IO Pin 032 (P2-12): IOPort
[   74.255172] hm2/hm2_5i25.0:     IO Pin 033 (P2-13): IOPort
[   74.255251] hm2/hm2_5i25.0: registered
[   74.255256] hm2_5i25.0: initialized AnyIO board at 0000:06:00.0
[   75.033068] hm2_5i25.0: dropping AnyIO board at 0000:06:00.0
[   75.033080] hm2/hm2_5i25.0: unregistered
[   75.033123] hm2_pci 0000:06:00.0: PCI INT A disabled
[   75.033169] hm2_pci: driver unloaded
[   75.037236] hm2: unloading
[   75.121139] RTAI[math]: unloaded.
[   75.159897] SCHED releases registered named ALIEN RTGLBH
[   75.188525] RTAI[malloc]: unloaded.
[   75.288239] RTAI[sched]: unloaded (forced hard/soft/hard transitions: traps 0, syscalls 0).
[   75.292535] I-pipe: Domain RTAI unregistered.
[   75.292647] RTAI[hal]: unmounted.