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I loaded it once and power cycled it, couldn't see anything, so I reuploaded the firmware and tried both power cycle and the --reload. I also enabled the additional encoders in my hal file.

Did you power cycle the 7I76EU (or use the --reload command)?
 

Loaded up the firmware, but I'm not seeing the stepgen index-enable pins.  I looked in hal configuration and halcmd show pin in the terminal but I couldn't find them.  Would it make it easier if I picked up another 7i85S so I could have an encoder for each stepgen?  Thanks again for your help.  

Thanks so much. I really appreciate it. I'll load it up and give it a try.