Sorry for the delay, I didn't have time to work on it last night.
Still same results. Here is the output.
Code:
ebartel@prototrak:~/Downloads/5i25/configs/hostmot2$ pwd
/home/ebartel/Downloads/5i25/configs/hostmot2
ebartel@prototrak:~/Downloads/5i25/configs/hostmot2$ md5sum 5i25_7i76x2
5i25_7i76x2.bit 5i25_7i76x2r.bit 5i25_7i76x2r.xml
5i25_7i76x2.pin 5i25_7i76x2r.pin 5i25_7i76x2.xml
ebartel@prototrak:~/Downloads/5i25/configs/hostmot2$ md5sum 5i25_7i76x2
5i25_7i76x2.bit 5i25_7i76x2r.bit 5i25_7i76x2r.xml
5i25_7i76x2.pin 5i25_7i76x2r.pin 5i25_7i76x2.xml
ebartel@prototrak:~/Downloads/5i25/configs/hostmot2$ md5sum 5i25_7i76x2.bit
cfe35f4106871ef627e6f0ad38cfa78e 5i25_7i76x2.bit
ebartel@prototrak:~/Downloads/5i25/configs/hostmot2$ sudo mesaflash --device 5i25 --write 5i25_7i76x2.bit
[sudo] password for ebartel:
Sorry, try again.
[sudo] password for ebartel:
Checking file... OK
File type: BIT file
Design name: TopPCIHostMot2b.ncd;UserID=0xFFFFFFFF
Part name: 6slx9tqg144
Design date: 2015/12/21
Design time: 16:46:04
Config Length: 340604
Boot sector OK
EEPROM sectors to write: 6, max sectors in area: 16
Erasing EEPROM sectors starting from 0x100000...
|EEEEEE
Programming EEPROM sectors starting from 0x100000...
|WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
Board configuration updated successfully.
You must power cycle board to load updated firmware.
ebartel@prototrak:~/Downloads/5i25/configs/hostmot2$ sudo mesaflash --device 5i25 --verify 5i25_7i76x2.bit
Checking file... OK
File type: BIT file
Design name: TopPCIHostMot2b.ncd;UserID=0xFFFFFFFF
Part name: 6slx9tqg144
Design date: 2015/12/21
Design time: 16:46:04
Config Length: 340604
Boot sector OK
Verifying EEPROM sectors starting from 0x100000...
|VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
Board configuration verified successfully
ebartel@prototrak:~/Downloads/5i25/configs/hostmot2$ sudo mesaflash --device 5i25 --reload