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The freq pin is 0 and the valid pin is false.  So it appears that there is an issue with the PWM measuring. 

PCW,

Okay, lets hope nothing is fried.  I will go try the outputs of PWM freq and valid now and report back.

I got a chance to spend some time with the oscilloscope today am getting interesting behavior out of the EDM supply.  What I am seeing is a sine wave that has an amplitude of about .5v. This entire sine wave moves up and down depending on the intensity of the EDM cut.  At no cut it is at 0 volts and at short it is at 3.3v.  In other words it seems to be behaving like an analog signal. It seems to me that will not work with the periodm func in mesa.  I have contacted the creator of the Powercore EDM to see if this is the correct behavior or if something was damaged. 

My alternative plan is to use an arduino that I have here to take the analog input and send it to the computer via USB to monitor cut duty cycle. Hopefully the python script that I am writing can accommodate communication with the arduino.