Error: Program Exceeds Machine Maximum, but gcode looks fine

So I tested it, 
 G0 G53 Z0

Results in the Z axis moving up away from the table all the way. The z axis ends up in the fully up position.

Sorry for the confusion. At least its clear now about Z machine zero. Another thing, if z retracts to G54 zero, and then cancel toollength (G49). You need a distance to machine zero of at least toollength. Just for testing, i would comment out G49 and try to load the file.

interesting results

results in the z axis moving all the way down (closest to table)
results in an error 

Also you can see in the screen shots that g49 results in no z offset of the gizmo
while g43, results in a gizmo offset equal to the tool length offset
results in the same error about exceed both z min and z max

@tommylight

interesting, I will endevour to correct the ini and associate settings, but before I do, you said PAGE UP should move z axis up, and PAGE DOWN should move z axis down. Well that is exactly what happens when using those 2 keyboard keys. So I am a little warry of flipping the axis and having them reversed.

I apologize for the confusion, the wrong ini and hal files got uploaded (old versions)
I am attaching the correct current versions


 

see that is the odd thing that I dont understand, it shouldnt be going to z -133, in the first screen shot i posted it only needs z -79. I am just all confused.
This is a cnc router with double y (a clone of the indymill  url=https://indystry.cc/indymill/]IndyMill – DIY Open Source Metal CNC Machine – Indystry.cc[/url). and it seems to handle the acceleration values without issue.

I have separate home and limit switches so they are physically offset from each other, hence the offsets. I use the limit switches only to prevent travel past the axis limits (they basically should never trigger, the software limits should catch it before the axis ever gets there) and then home switch for homing.
 

Ok, so my limit switches and home switches might be configured oddly, and my accelerations may be high, but this still doesnt help me understand my original issue with the linuxcnc gcode preview not showing any out of bounds moves, but it still complaining about z axis limits being exceeded.