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I was thinking that but If I watch X and Y or j0 and J1 Position and Position feedback pins in Hal with the following error cranked up I can see it actually home and the values stop but the physical motors just keep rolling coal so to say. It's like Linux cnc think everything is fine but the stepper modules never got the message to stop. Even looking at the Ethercat pins, lcec.0.D2.srv-cmd pin stops when home is set but motors still spinning. Also swapping Kins back out to trivkins shows the same behavior during homing. That's why I was wondering if it's something to do with the ethercat setup perhaps?

Do you get the same if you use a program rather then MDI?